Uusi opinto-opas (sisältäen myös opetusohjelmat) lukuvuodelle 2018-2019 sijaitsee osoitteessa https://opas.peppi.utu.fi . Tältä sivustolta löytyvät enää vanhat opinto-oppaat ja opetusohjelmat.

The new study guide (incl. teaching schedules) for academic year 2018-2019 can be found at https://studyguide.utu.fi. This site contains only previous years' guides.

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Archived Curricula Guide 2013–2014
Curricula Guide is archieved. Please refer to current Curricula Guides
FYGE5350 Molecular systematics 3–6 ECTS
Organised by
Physiology and Genetics
Person in charge
Niklas Wahlberg, niklas.wahlberg@utu.fi
Preceding studies
Basic knowledge of evolutionary biology (e.g. equivalent of that taught in the course: FYGE2211 Genetics of Natural Populations) and molecular genetics (e.g. SOMO1001-2 Molecular biolog)y will be assumed . Students interested in taking the course who do not fulfill this requirement should contact the organizers to arrange background reading prior to the start of the course. Please sign up for the course by indicating your interest in a brief email to Niklas Wahlberg at niklas.wahlberg@utu.fi Also, please include a brief statement of knowledge of evolutionary biology and molecular genetics (e.g. courses taken).

Learning outcomes

The aims of this course are to introduce the theory and practice of phylogenetic inference from molecular data and to provide an introduction to some of the most used methods and computer programs. These include methods such as parsimony, maximum likelihood, Bayesian inference and distance estimates.

Contents

The course will consist of lectures, demonstrations of computer programs, independent projects on fully analysing an example dataset (either your own or given by the lecturer), discussions and a final seminar presenting the results of the independent projects. Independent projects can be done alone or in pairs. Most programs we will be using will be freeware or shareware. If you would like to analyse your own datasets, please be aware that they should consist of at least two genes and must not exceed 30 taxa (otherwise analysis times will exceed the course duration!).

Teaching methods

Teaching method Contact Online
Lectures
Independent work
Exercises

Teaching language

English

Modes of study

Option 1
Available for:
  • Degree Programme Students
  • Other Students
  • Doctoral Students
  • Exchange Students
Participation in classroom work
  • In English
Project / practical work
  • In English
Seminar
  • In English
Oral exam
  • In English
English:
Participation in classroom work and Project / practical work and Seminar and Oral presentation

Evaluation

Numeric 0-5.

Recommended year of study

4. year autumn
5. year autumn

Masters level course. The course will be arranged every year.

Further information

Register via nettiopsu.utu.fi. Course will be given, if at least 6 students register for the course.

Belongs to following study modules

Department of Biology
Department of Biology
Department of Biology
2013–2014
Teaching
Archived Teaching Schedule. Please refer to current Teaching Shedule.
Department of Biology
DP in Biology
Finnish Study Modules